Stains and Dyes

A variety of solutions used to selectively bind to and enhance the visibility of biological structures using color and/or fluorescence; used for histology, protein staining, electrophoresis, bacterial classification, blotting, etc.

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Thermo Scientific Chemicals Nile Red, 99%, pure

CAS: 7385-67-3 Molecular Formula: C20H18N2O2 Molecular Weight (g/mol): 318.38 MDL Number: MFCD00011639 InChI Key: VOFUROIFQGPCGE-UHFFFAOYSA-N Synonym: Nile blue A oxazone PubChem CID: 65182 ChEBI: CHEBI:52169 SMILES: CCN(CC)C1=CC=C2N=C3C(OC2=C1)=CC(=O)C1=CC=CC=C31

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Specifications

PubChem CID	65182
CAS	7385-67-3
Molecular Weight (g/mol)	318.38
ChEBI	CHEBI:52169
MDL Number	MFCD00011639
SMILES	CCN(CC)C1=CC=C2N=C3C(OC2=C1)=CC(=O)C1=CC=CC=C31
Synonym	Nile blue A oxazone
InChI Key	VOFUROIFQGPCGE-UHFFFAOYSA-N
Molecular Formula	C20H18N2O2

Thermo Scientific Chemicals Methyl Orange, 0.1% w/v aq. soln.

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Thermo Scientific Chemicals Methylene Blue, 1% w/v aq. soln.

CAS: 122965-43-9 | C₁₆H₁₈ClN₃S

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Specifications

Concentration or Composition (by Analyte or Components)	3, 7-Bis(dimethylamino)phenothiazin-5-ium chloride hydrate: 1.0%; Water: 99%
CAS	7732-18-5
MDL Number	MFCD00012111
Physical Form	Liquid
Solubility Information	Miscible with ethanol,chloroform,glacial acetic acid and glycerol. Slightly miscible with pyridine. Immiscible with ethyl ether,xylene,oleic acid,ethanol and acetone.
Chemical Name or Material	Methylene Blue
TSCA	Yes
Recommended Storage	Ambient temperatures
Molecular Formula	C₁₆H₁₈ClN₃S
Formula Weight	319.86
Vapor Pressure	23 hPa (17mm Hg) at 20°C
Assay Percent Range	1% w/v aqueous solution

Bromothymol Blue sodium salt, 0.04% w/v aq. soln.

CAS: 34722-90-2 Molecular Formula: C27H27Br2NaO5S Molecular Weight (g/mol): 646.37 MDL Number: MFCD00077263,MFCD00077263,MFCD00077263 InChI Key: NMKFVGALBGZKGW-FKWCIMQXSA-M PubChem CID: 102183223 SMILES: [Na+].CC(C)C1=CC(\C(C2=CC=CC=C2S([O-])(=O)=O)=C2/C=C(C(C)C)C(=O)C(Br)=C2C)=C(C)C(Br)=C1O

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Specifications

PubChem CID	102183223
CAS	34722-90-2
Molecular Weight (g/mol)	646.37
MDL Number	MFCD00077263,MFCD00077263,MFCD00077263
SMILES	[Na+].CC(C)C1=CC(\C(C2=CC=CC=C2S([O-])(=O)=O)=C2/C=C(C(C)C)C(=O)C(Br)=C2C)=C(C)C(Br)=C1O
InChI Key	NMKFVGALBGZKGW-FKWCIMQXSA-M
Molecular Formula	C27H27Br2NaO5S

Thermo Scientific Chemicals Eriochrome Black T

CAS: 1787-61-7 Molecular Formula: C20H12N3NaO7S Molecular Weight (g/mol): 461.38 MDL Number: MFCD00003935 InChI Key: JHUJLRKQZAPSDP-GXTSIBQPSA-M Synonym: C.I. 14645; Mordant Black 11 PubChem CID: 87355429 SMILES: [Na+].OC1=C2C=CC=CC2=CC=C1N\N=C1/C(=O)C=C(C2=CC(=CC=C12)[N+]([O-])=O)S([O-])(=O)=O

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Specifications

PubChem CID	87355429
CAS	1787-61-7
Molecular Weight (g/mol)	461.38
MDL Number	MFCD00003935
SMILES	[Na+].OC1=C2C=CC=CC2=CC=C1N\N=C1/C(=O)C=C(C2=CC(=CC=C12)[N+]([O-])=O)S([O-])(=O)=O
Synonym	C.I. 14645; Mordant Black 11
InChI Key	JHUJLRKQZAPSDP-GXTSIBQPSA-M
Molecular Formula	C20H12N3NaO7S

Thermo Scientific Chemicals Phenol Red, pure, indicator

CAS: 143-74-8 Molecular Formula: C19H14O5S Molecular Weight (g/mol): 354.38 MDL Number: MFCD00003552 InChI Key: BELBBZDIHDAJOR-UHFFFAOYSA-N Synonym: Phenolsulfonephthalein PubChem CID: 4766 ChEBI: CHEBI:31991 SMILES: OC1=CC=C(C=C1)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC=C(O)C=C1

Pricing and Availability
Specifications

PubChem CID	4766
CAS	143-74-8
Molecular Weight (g/mol)	354.38
ChEBI	CHEBI:31991
MDL Number	MFCD00003552
SMILES	OC1=CC=C(C=C1)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC=C(O)C=C1
Synonym	Phenolsulfonephthalein
InChI Key	BELBBZDIHDAJOR-UHFFFAOYSA-N
Molecular Formula	C19H14O5S

Thermo Scientific Chemicals Bromocresol Purple

CAS: 115-40-2 Molecular Formula: C21H16Br2O5S Molecular Weight (g/mol): 540.22 MDL Number: MFCD00011681 InChI Key: ABIUHPWEYMSGSR-UHFFFAOYSA-N PubChem CID: 8273 ChEBI: CHEBI:86154 IUPAC Name: 2-bromo-4-[3-(3-bromo-4-hydroxy-5-methylphenyl)-1,1-dioxo-2,1$l^{6}-benzoxathiol-3-yl]-6-methylphenol SMILES: CC1=CC(=CC(Br)=C1O)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC(C)=C(O)C(Br)=C1

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Specifications

PubChem CID	8273
CAS	115-40-2
Molecular Weight (g/mol)	540.22
ChEBI	CHEBI:86154
MDL Number	MFCD00011681
SMILES	CC1=CC(=CC(Br)=C1O)C1(OS(=O)(=O)C2=CC=CC=C12)C1=CC(C)=C(O)C(Br)=C1
IUPAC Name	2-bromo-4-[3-(3-bromo-4-hydroxy-5-methylphenyl)-1,1-dioxo-2,1$l^{6}-benzoxathiol-3-yl]-6-methylphenol
InChI Key	ABIUHPWEYMSGSR-UHFFFAOYSA-N
Molecular Formula	C21H16Br2O5S

Orange G, Electrophoresis Grade

CAS: 1936-15-8 Molecular Formula: C16H10N2Na2O7S2 Molecular Weight (g/mol): 452.36 MDL Number: MFCD00012457 InChI Key: AEOVEGJBKQQFOP-DDVLFWKVSA-L Synonym: C.I. 16230; Acid Orange 10 PubChem CID: 131850556 SMILES: [Na+].[Na+].[O-]S(=O)(=O)C1=CC2=C(\C(=N\NC3=CC=CC=C3)C(=O)C=C2)C(=C1)S([O-])(=O)=O

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Specifications

PubChem CID	131850556
CAS	1936-15-8
Molecular Weight (g/mol)	452.36
MDL Number	MFCD00012457
SMILES	[Na+].[Na+].[O-]S(=O)(=O)C1=CC2=C(\C(=N\NC3=CC=CC=C3)C(=O)C=C2)C(=C1)S([O-])(=O)=O
Synonym	C.I. 16230; Acid Orange 10
InChI Key	AEOVEGJBKQQFOP-DDVLFWKVSA-L
Molecular Formula	C16H10N2Na2O7S2

Thermo Scientific Chemicals Xylenol Orange, sodium salt, pure, water soluble

CAS: 3618-43-7 Molecular Formula: C₃₁H₂₈N₂Na₄O₁₃S

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Specifications

CAS	3618-43-7
Molecular Formula	C₃₁H₂₈N₂Na₄O₁₃S

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Nitro Blue Tetrazolium chloride, 98+%

CAS: 298-83-9 Molecular Formula: C40H30Cl2N10O6 Molecular Weight (g/mol): 817.644 MDL Number: MFCD00012159 InChI Key: FSVCQIDHPKZJSO-UHFFFAOYSA-L Synonym: Nitro BT; Nitrotetrazolium Blue chloride PubChem CID: 9281 ChEBI: CHEBI:9505 IUPAC Name: 2-[2-methoxy-4-[3-methoxy-4-[3-(4-nitrophenyl)-5-phenyltetrazol-2-ium-2-yl]phenyl]phenyl]-3-(4-nitrophenyl)-5-phenyltetrazol-2-ium;dichloride SMILES: COC1=C(C=CC(=C1)C2=CC(=C(C=C2)[N+]3=NC(=NN3C4=CC=C(C=C4)[N+](=O)[O-])C5=CC=CC=C5)OC)[N+]6=NC(=NN6C7=CC=C(C=C7)[N+](=O)[O-])C8=CC=CC=C8.[Cl-].[Cl-]

Pricing and Availability
Specifications

PubChem CID	9281
CAS	298-83-9
Molecular Weight (g/mol)	817.644
ChEBI	CHEBI:9505
MDL Number	MFCD00012159
SMILES	COC1=C(C=CC(=C1)C2=CC(=C(C=C2)[N+]3=NC(=NN3C4=CC=C(C=C4)[N+](=O)[O-])C5=CC=CC=C5)OC)[N+]6=NC(=NN6C7=CC=C(C=C7)[N+](=O)[O-])C8=CC=CC=C8.[Cl-].[Cl-]
Synonym	Nitro BT; Nitrotetrazolium Blue chloride
IUPAC Name	2-[2-methoxy-4-[3-methoxy-4-[3-(4-nitrophenyl)-5-phenyltetrazol-2-ium-2-yl]phenyl]phenyl]-3-(4-nitrophenyl)-5-phenyltetrazol-2-ium;dichloride
InChI Key	FSVCQIDHPKZJSO-UHFFFAOYSA-L
Molecular Formula	C40H30Cl2N10O6

Thermo Scientific Chemicals Sudan Red 7B

CAS: 6368-72-5 Molecular Formula: C24H21N5 Molecular Weight (g/mol): 379.467 MDL Number: MFCD00003904 InChI Key: VKWNTWQXVLKCSG-UHFFFAOYSA-N Synonym: C.I. 26050,N-Ethyl-1-[4-(phenylazo)phenylazo]-2-naphthylamine,Fat Red 7B,Solvent Red 19 PubChem CID: 61396 IUPAC Name: N-ethyl-1-[(4-phenyldiazenylphenyl)diazenyl]naphthalen-2-amine SMILES: CCNC1=C(C2=CC=CC=C2C=C1)N=NC3=CC=C(C=C3)N=NC4=CC=CC=C4

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Specifications

PubChem CID	61396
CAS	6368-72-5
Molecular Weight (g/mol)	379.467
MDL Number	MFCD00003904
SMILES	CCNC1=C(C2=CC=CC=C2C=C1)N=NC3=CC=C(C=C3)N=NC4=CC=CC=C4
Synonym	C.I. 26050,N-Ethyl-1-[4-(phenylazo)phenylazo]-2-naphthylamine,Fat Red 7B,Solvent Red 19
IUPAC Name	N-ethyl-1-[(4-phenyldiazenylphenyl)diazenyl]naphthalen-2-amine
InChI Key	VKWNTWQXVLKCSG-UHFFFAOYSA-N
Molecular Formula	C24H21N5

Thermo Scientific Chemicals Thymol Blue, pure, indicator

CAS: 76-61-9 Molecular Formula: C27H30O5S Molecular Weight (g/mol): 466.592 MDL Number: MFCD00005869 InChI Key: PRZSXZWFJHEZBJ-UHFFFAOYSA-N Synonym: TB,Thymolsulfonephthalein PubChem CID: 65565 IUPAC Name: 4-[3-(4-hydroxy-2-methyl-5-propan-2-ylphenyl)-1,1-dioxo-2,1$l^{6}-benzoxathiol-3-yl]-5-methyl-2-propan-2-ylphenol SMILES: CC1=CC(=C(C=C1C2(C3=CC=CC=C3S(=O)(=O)O2)C4=CC(=C(C=C4C)O)C(C)C)C(C)C)O

Pricing and Availability
Specifications

PubChem CID	65565
CAS	76-61-9
Molecular Weight (g/mol)	466.592
MDL Number	MFCD00005869
SMILES	CC1=CC(=C(C=C1C2(C3=CC=CC=C3S(=O)(=O)O2)C4=CC(=C(C=C4C)O)C(C)C)C(C)C)O
Synonym	TB,Thymolsulfonephthalein
IUPAC Name	4-[3-(4-hydroxy-2-methyl-5-propan-2-ylphenyl)-1,1-dioxo-2,1$l^{6}-benzoxathiol-3-yl]-5-methyl-2-propan-2-ylphenol
InChI Key	PRZSXZWFJHEZBJ-UHFFFAOYSA-N
Molecular Formula	C27H30O5S

Thermo Scientific Chemicals Bromocresol Green

CAS: 76-60-8 Molecular Formula: C21H14Br4O5S Molecular Weight (g/mol): 698.014 MDL Number: MFCD00005874 InChI Key: FRPHFZCDPYBUAU-UHFFFAOYSA-N Synonym: Bromcresol Green PubChem CID: 6451 IUPAC Name: 2,6-dibromo-4-[3-(3,5-dibromo-4-hydroxy-2-methylphenyl)-1,1-dioxo-2,1$l^{6}-benzoxathiol-3-yl]-3-methylphenol SMILES: CC1=C(C(=C(C=C1C2(C3=CC=CC=C3S(=O)(=O)O2)C4=CC(=C(C(=C4C)Br)O)Br)Br)O)Br

Pricing and Availability
Specifications

PubChem CID	6451
CAS	76-60-8
Molecular Weight (g/mol)	698.014
MDL Number	MFCD00005874
SMILES	CC1=C(C(=C(C=C1C2(C3=CC=CC=C3S(=O)(=O)O2)C4=CC(=C(C(=C4C)Br)O)Br)Br)O)Br
Synonym	Bromcresol Green
IUPAC Name	2,6-dibromo-4-[3-(3,5-dibromo-4-hydroxy-2-methylphenyl)-1,1-dioxo-2,1$l^{6}-benzoxathiol-3-yl]-3-methylphenol
InChI Key	FRPHFZCDPYBUAU-UHFFFAOYSA-N
Molecular Formula	C21H14Br4O5S

Thermo Scientific Chemicals Methyl blue

CAS: 28983-56-4 Molecular Formula: C37H26N3Na2O9S3 Molecular Weight (g/mol): 798.79 MDL Number: MFCD00058509 InChI Key: TUHAIJABPUJAEY-UHFFFAOYSA-K Synonym: Acid blue 93; C.I. 42780 PubChem CID: 76956083 SMILES: [Na+].[Na+].[O-]S(=O)(=O)C1=CC=CC=C1NC1=CC=C(C=C1)C(C1=CC=C(NC2=CC=CC=C2S([O-])(=O)=O)C=C1)=C1C=CC(C=C1)=NC1=CC=CC=C1S([O-])(=O)=O

Pricing and Availability
Specifications

PubChem CID	76956083
CAS	28983-56-4
Molecular Weight (g/mol)	798.79
MDL Number	MFCD00058509
SMILES	[Na+].[Na+].[O-]S(=O)(=O)C1=CC=CC=C1NC1=CC=C(C=C1)C(C1=CC=C(NC2=CC=CC=C2S([O-])(=O)=O)C=C1)=C1C=CC(C=C1)=NC1=CC=CC=C1S([O-])(=O)=O
Synonym	Acid blue 93; C.I. 42780
InChI Key	TUHAIJABPUJAEY-UHFFFAOYSA-K
Molecular Formula	C37H26N3Na2O9S3

Thermo Scientific Chemicals Eosin Y, pure, certified

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